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Table 1 Gene amplification and sequencing primers for HIV-1 pol

From: HIV drug resistance: analysis of viral genotypes and mutation loci in people living with HIV in Chongqing, China (2016–2023)

Procedure

Primers

Positiona

Length of target fragment

Sequences (5’-3’)

First round

2029 F

2029–2050

1501

TGGAAATGTGGRAAGGAAGGAC

 

3529R

3529–3505

 

GCTAyyAAGTCTTTTGATGGGTCAT

Second round

2249 F

2249–2266

1273

CTTCCCTCARATCACTCT

 

3521R

3521–3504

 

GTCTTTTGATGGGTCATA

  1. Positions a: Positions of nucleotides within the HIV HXB2 strain (GenBank accession number: K03455)