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Fig. 2 | AIDS Research and Therapy

Fig. 2

From: Epidemic of multiple Treponema pallidum strains in men who have sex with men in Japan: efficient multi-locus sequence typing scheme and indicator biomarkers

Fig. 2

Phylogenetic tree of the identified sequence types from multi-locus sequence typing. The evolutionary history was elucidated using the Maximum Likelihood method. The percentage of trees in which the associated taxa clustered together is presented next to the branches. Initial trees for the heuristic search were automatically generated by applying Neighbor-Join and BioNJ algorithms to a matrix of pairwise distances estimated through the Maximum Composite Likelihood approach

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